Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb7Q8CDY9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb7Q8CDY9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb7Q8CDY9 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.02■□□□□ 0.96
Pcdhb7Q8CDY9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb7Q8CDY9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb7Q8CDY9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb7Q8CDY9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb7Q8CDY9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.02■□□□□ 0.95
Pcdhb7Q8CDY9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb7Q8CDY9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb7Q8CDY9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb7Q8CDY9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb7Q8CDY9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb7Q8CDY9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb7Q8CDY9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb7Q8CDY9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb7Q8CDY9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb7Q8CDY9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb7Q8CDY9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdhb7Q8CDY9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb7Q8CDY9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb7Q8CDY9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Pcdhb7Q8CDY9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb7Q8CDY9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhb7Q8CDY9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb7Q8CDY9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb7Q8CDY9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb7Q8CDY9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb7Q8CDY9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb7Q8CDY9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb7Q8CDY9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms