Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm9959-201ENSMUST00000068277 390 ntBASIC20.22■□□□□ 0.83
SynpoQ8CC35 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.22■□□□□ 0.83
SynpoQ8CC35 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynpoQ8CC35 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SynpoQ8CC35 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SynpoQ8CC35 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SynpoQ8CC35 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SynpoQ8CC35 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynpoQ8CC35 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SynpoQ8CC35 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SynpoQ8CC35 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.2■□□□□ 0.82
SynpoQ8CC35 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynpoQ8CC35 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynpoQ8CC35 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SynpoQ8CC35 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SynpoQ8CC35 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.18■□□□□ 0.82
SynpoQ8CC35 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.18■□□□□ 0.82
SynpoQ8CC35 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SynpoQ8CC35 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SynpoQ8CC35 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SynpoQ8CC35 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SynpoQ8CC35 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SynpoQ8CC35 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SynpoQ8CC35 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.16■□□□□ 0.82
SynpoQ8CC35 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SynpoQ8CC35 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SynpoQ8CC35 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SynpoQ8CC35 Etf1-202ENSMUST00000180351 108 ntBASIC20.15■□□□□ 0.82
SynpoQ8CC35 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SynpoQ8CC35 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SynpoQ8CC35 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
SynpoQ8CC35 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SynpoQ8CC35 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.14■□□□□ 0.81
SynpoQ8CC35 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynpoQ8CC35 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.13■□□□□ 0.81
SynpoQ8CC35 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynpoQ8CC35 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SynpoQ8CC35 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms