Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf170Q8CBG9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf170Q8CBG9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf170Q8CBG9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf170Q8CBG9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf170Q8CBG9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf170Q8CBG9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf170Q8CBG9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf170Q8CBG9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf170Q8CBG9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf170Q8CBG9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf170Q8CBG9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf170Q8CBG9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf170Q8CBG9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf170Q8CBG9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Gm10420-201ENSMUST00000121713 882 ntBASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Rnf170Q8CBG9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms