Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Suds3Q8BR65 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Gm13238-201ENSMUST00000117655 780 ntBASIC21.43■■□□□ 1.02
Suds3Q8BR65 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Suds3Q8BR65 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.42■■□□□ 1.02
Suds3Q8BR65 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.42■■□□□ 1.02
Suds3Q8BR65 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Suds3Q8BR65 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.41■■□□□ 1.02
Suds3Q8BR65 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Suds3Q8BR65 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Suds3Q8BR65 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Gm5812-201ENSMUST00000061073 957 ntBASIC21.4■■□□□ 1.02
Suds3Q8BR65 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Suds3Q8BR65 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Suds3Q8BR65 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.39■■□□□ 1.02
Suds3Q8BR65 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Suds3Q8BR65 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Suds3Q8BR65 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Gm15820-201ENSMUST00000201566 728 ntBASIC21.39■■□□□ 1.01
Suds3Q8BR65 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.39■■□□□ 1.01
Suds3Q8BR65 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Suds3Q8BR65 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Suds3Q8BR65 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Suds3Q8BR65 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Suds3Q8BR65 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
Suds3Q8BR65 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Suds3Q8BR65 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Suds3Q8BR65 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Suds3Q8BR65 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Suds3Q8BR65 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Suds3Q8BR65 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
Suds3Q8BR65 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Gm45444-201ENSMUST00000211394 898 ntBASIC21.36■■□□□ 1.01
Suds3Q8BR65 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Suds3Q8BR65 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.36■■□□□ 1.01
Suds3Q8BR65 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.36■■□□□ 1.01
Suds3Q8BR65 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.35■■□□□ 1.01
Suds3Q8BR65 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Suds3Q8BR65 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Suds3Q8BR65 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Suds3Q8BR65 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Suds3Q8BR65 Gm15546-201ENSMUST00000122095 826 ntBASIC21.34■■□□□ 1.01
Suds3Q8BR65 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.33■■□□□ 1.01
Suds3Q8BR65 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.33■■□□□ 1.01
Suds3Q8BR65 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Suds3Q8BR65 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Suds3Q8BR65 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Suds3Q8BR65 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Suds3Q8BR65 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.32■■□□□ 1
Suds3Q8BR65 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Suds3Q8BR65 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Suds3Q8BR65 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.32■■□□□ 1
Suds3Q8BR65 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Suds3Q8BR65 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.32■■□□□ 1
Suds3Q8BR65 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Suds3Q8BR65 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Suds3Q8BR65 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Suds3Q8BR65 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.31■■□□□ 1
Suds3Q8BR65 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Suds3Q8BR65 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.31■■□□□ 1
Suds3Q8BR65 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Suds3Q8BR65 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Suds3Q8BR65 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms