Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Rnf38Q8BI21 Notumos-201ENSMUST00000151998 2659 ntBASIC20.24■□□□□ 0.83
Rnf38Q8BI21 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf38Q8BI21 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf38Q8BI21 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf38Q8BI21 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.21■□□□□ 0.83
Rnf38Q8BI21 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf38Q8BI21 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.2■□□□□ 0.83
Rnf38Q8BI21 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Gm14523-201ENSMUST00000117260 558 ntBASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Gm12366-201ENSMUST00000121722 873 ntBASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Gm5786-201ENSMUST00000085368 882 ntBASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf38Q8BI21 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf38Q8BI21 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rnf38Q8BI21 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf38Q8BI21 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf38Q8BI21 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.15■□□□□ 0.82
Rnf38Q8BI21 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf38Q8BI21 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf38Q8BI21 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf38Q8BI21 Cap2-205ENSMUST00000225824 1634 ntBASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Gm7332-201ENSMUST00000118351 454 ntBASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms