Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubp1Q811S7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubp1Q811S7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ubp1Q811S7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.7■□□□□ 0.9
Ubp1Q811S7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubp1Q811S7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubp1Q811S7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ubp1Q811S7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubp1Q811S7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubp1Q811S7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ubp1Q811S7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.68■□□□□ 0.9
Ubp1Q811S7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubp1Q811S7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Ubp1Q811S7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubp1Q811S7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubp1Q811S7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.65■□□□□ 0.9
Ubp1Q811S7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubp1Q811S7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubp1Q811S7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubp1Q811S7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubp1Q811S7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ubp1Q811S7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubp1Q811S7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ubp1Q811S7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ubp1Q811S7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubp1Q811S7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubp1Q811S7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ubp1Q811S7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubp1Q811S7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubp1Q811S7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubp1Q811S7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.6■□□□□ 0.89
Ubp1Q811S7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubp1Q811S7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubp1Q811S7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.59■□□□□ 0.89
Ubp1Q811S7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubp1Q811S7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ubp1Q811S7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubp1Q811S7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubp1Q811S7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubp1Q811S7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 167.7 ms