Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc116Q80X53 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc116Q80X53 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc116Q80X53 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc116Q80X53 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc116Q80X53 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc116Q80X53 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Ccdc116Q80X53 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc116Q80X53 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc116Q80X53 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc116Q80X53 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc116Q80X53 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc116Q80X53 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc116Q80X53 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc116Q80X53 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc116Q80X53 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.55■□□□□ 0.88
Ccdc116Q80X53 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc116Q80X53 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc116Q80X53 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc116Q80X53 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc116Q80X53 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc116Q80X53 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc116Q80X53 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Ccdc116Q80X53 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc116Q80X53 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc116Q80X53 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.52■□□□□ 0.87
Ccdc116Q80X53 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.51■□□□□ 0.87
Ccdc116Q80X53 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc116Q80X53 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc116Q80X53 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc116Q80X53 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms