Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp38Q80UU2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp38Q80UU2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp38Q80UU2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp38Q80UU2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp38Q80UU2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp38Q80UU2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Rpp38Q80UU2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpp38Q80UU2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Rpp38Q80UU2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Rpp38Q80UU2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp38Q80UU2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp38Q80UU2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp38Q80UU2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp38Q80UU2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp38Q80UU2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp38Q80UU2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp38Q80UU2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.12■□□□□ 0.97
Rpp38Q80UU2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rpp38Q80UU2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp38Q80UU2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp38Q80UU2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp38Q80UU2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Rpp38Q80UU2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rpp38Q80UU2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Gm10232-201ENSMUST00000089221 720 ntBASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpp38Q80UU2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rpp38Q80UU2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpp38Q80UU2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpp38Q80UU2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp38Q80UU2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp38Q80UU2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rpp38Q80UU2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp38Q80UU2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp38Q80UU2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms