Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scn10aQ6QIY3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Gm9870-201ENSMUST00000063874 645 ntBASIC24.6■■□□□ 1.53
Scn10aQ6QIY3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scn10aQ6QIY3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Scn10aQ6QIY3 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.58■■□□□ 1.53
Scn10aQ6QIY3 Gm43173-201ENSMUST00000202246 593 ntBASIC24.58■■□□□ 1.53
Scn10aQ6QIY3 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.58■■□□□ 1.53
Scn10aQ6QIY3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Scn10aQ6QIY3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Scn10aQ6QIY3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.57■■□□□ 1.52
Scn10aQ6QIY3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Scn10aQ6QIY3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
Scn10aQ6QIY3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Scn10aQ6QIY3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scn10aQ6QIY3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.56■■□□□ 1.52
Scn10aQ6QIY3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scn10aQ6QIY3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.55■■□□□ 1.52
Scn10aQ6QIY3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Scn10aQ6QIY3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Scn10aQ6QIY3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scn10aQ6QIY3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Mir7075-201ENSMUST00000184187 82 ntBASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Scn10aQ6QIY3 Gm29257-201ENSMUST00000186115 639 ntBASIC24.53■■□□□ 1.52
Scn10aQ6QIY3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scn10aQ6QIY3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scn10aQ6QIY3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Scn10aQ6QIY3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
Scn10aQ6QIY3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Scn10aQ6QIY3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Scn10aQ6QIY3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Scn10aQ6QIY3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.48■■□□□ 1.51
Scn10aQ6QIY3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Scn10aQ6QIY3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Scn10aQ6QIY3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Scn10aQ6QIY3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Scn10aQ6QIY3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scn10aQ6QIY3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
Scn10aQ6QIY3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Scn10aQ6QIY3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Scn10aQ6QIY3 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.45■■□□□ 1.5
Scn10aQ6QIY3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Scn10aQ6QIY3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Scn10aQ6QIY3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Scn10aQ6QIY3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scn10aQ6QIY3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.43■■□□□ 1.5
Scn10aQ6QIY3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scn10aQ6QIY3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms