Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm10399-202ENSMUST00000202768 748 ntBASIC20.66■□□□□ 0.9
VclQ64727 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VclQ64727 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.66■□□□□ 0.9
VclQ64727 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.65■□□□□ 0.9
VclQ64727 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.65■□□□□ 0.9
VclQ64727 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.65■□□□□ 0.9
VclQ64727 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VclQ64727 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.64■□□□□ 0.9
VclQ64727 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Etf1-202ENSMUST00000180351 108 ntBASIC20.64■□□□□ 0.89
VclQ64727 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.63■□□□□ 0.89
VclQ64727 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
VclQ64727 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.63■□□□□ 0.89
VclQ64727 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
VclQ64727 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Gm45102-201ENSMUST00000207427 857 ntBASIC20.62■□□□□ 0.89
VclQ64727 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VclQ64727 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VclQ64727 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Gm9959-201ENSMUST00000068277 390 ntBASIC20.61■□□□□ 0.89
VclQ64727 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.6■□□□□ 0.89
VclQ64727 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
VclQ64727 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VclQ64727 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.59■□□□□ 0.89
VclQ64727 Gm40881-201ENSMUST00000223397 166 ntBASIC20.59■□□□□ 0.89
VclQ64727 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.59■□□□□ 0.89
VclQ64727 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
VclQ64727 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
VclQ64727 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Gm7417-201ENSMUST00000192950 473 ntBASIC20.58■□□□□ 0.89
VclQ64727 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VclQ64727 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VclQ64727 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.57■□□□□ 0.88
VclQ64727 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VclQ64727 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VclQ64727 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms