Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.15■□□□□ 0.82
Sdc3Q64519 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.15■□□□□ 0.82
Sdc3Q64519 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sdc3Q64519 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.14■□□□□ 0.81
Sdc3Q64519 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.14■□□□□ 0.81
Sdc3Q64519 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.14■□□□□ 0.81
Sdc3Q64519 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sdc3Q64519 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdc3Q64519 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Sdc3Q64519 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.13■□□□□ 0.81
Sdc3Q64519 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc3Q64519 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc3Q64519 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sdc3Q64519 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Sdc3Q64519 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.12■□□□□ 0.81
Sdc3Q64519 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc3Q64519 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.11■□□□□ 0.81
Sdc3Q64519 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.11■□□□□ 0.81
Sdc3Q64519 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.11■□□□□ 0.81
Sdc3Q64519 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc3Q64519 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc3Q64519 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc3Q64519 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc3Q64519 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc3Q64519 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.1■□□□□ 0.81
Sdc3Q64519 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.1■□□□□ 0.81
Sdc3Q64519 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc3Q64519 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc3Q64519 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.09■□□□□ 0.81
Sdc3Q64519 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.09■□□□□ 0.81
Sdc3Q64519 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.09■□□□□ 0.81
Sdc3Q64519 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc3Q64519 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc3Q64519 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Sdc3Q64519 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.08■□□□□ 0.81
Sdc3Q64519 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.08■□□□□ 0.81
Sdc3Q64519 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sdc3Q64519 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sdc3Q64519 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc3Q64519 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc3Q64519 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc3Q64519 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc3Q64519 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc3Q64519 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.07■□□□□ 0.8
Sdc3Q64519 Gm7417-201ENSMUST00000192950 473 ntBASIC20.06■□□□□ 0.8
Sdc3Q64519 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc3Q64519 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.06■□□□□ 0.8
Sdc3Q64519 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc3Q64519 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc3Q64519 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sdc3Q64519 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sdc3Q64519 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.05■□□□□ 0.8
Sdc3Q64519 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.05■□□□□ 0.8
Sdc3Q64519 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc3Q64519 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc3Q64519 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc3Q64519 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc3Q64519 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sdc3Q64519 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc3Q64519 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc3Q64519 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.04■□□□□ 0.8
Sdc3Q64519 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.04■□□□□ 0.8
Sdc3Q64519 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc3Q64519 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdc3Q64519 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Sdc3Q64519 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc3Q64519 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc3Q64519 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.03■□□□□ 0.8
Sdc3Q64519 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.03■□□□□ 0.8
Sdc3Q64519 Gm40881-201ENSMUST00000223397 166 ntBASIC20.03■□□□□ 0.8
Sdc3Q64519 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc3Q64519 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sdc3Q64519 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Sdc3Q64519 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc3Q64519 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc3Q64519 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sdc3Q64519 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms