Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn4Q61418 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn4Q61418 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.26■□□□□ 0.67
Clcn4Q61418 Gm5812-201ENSMUST00000061073 957 ntBASIC19.26■□□□□ 0.67
Clcn4Q61418 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn4Q61418 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Clcn4Q61418 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn4Q61418 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn4Q61418 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn4Q61418 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn4Q61418 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn4Q61418 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clcn4Q61418 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn4Q61418 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clcn4Q61418 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn4Q61418 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clcn4Q61418 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn4Q61418 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.24■□□□□ 0.67
Clcn4Q61418 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Clcn4Q61418 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn4Q61418 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn4Q61418 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn4Q61418 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Clcn4Q61418 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn4Q61418 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn4Q61418 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn4Q61418 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn4Q61418 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn4Q61418 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clcn4Q61418 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.21■□□□□ 0.67
Clcn4Q61418 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clcn4Q61418 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn4Q61418 Notumos-201ENSMUST00000151998 2659 ntBASIC19.2■□□□□ 0.66
Clcn4Q61418 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn4Q61418 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Clcn4Q61418 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn4Q61418 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn4Q61418 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Clcn4Q61418 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn4Q61418 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn4Q61418 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn4Q61418 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Clcn4Q61418 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn4Q61418 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn4Q61418 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn4Q61418 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn4Q61418 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn4Q61418 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.17■□□□□ 0.66
Clcn4Q61418 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clcn4Q61418 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Clcn4Q61418 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn4Q61418 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn4Q61418 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Clcn4Q61418 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.17■□□□□ 0.66
Clcn4Q61418 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clcn4Q61418 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn4Q61418 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn4Q61418 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn4Q61418 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clcn4Q61418 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn4Q61418 Gm15546-201ENSMUST00000122095 826 ntBASIC19.15■□□□□ 0.66
Clcn4Q61418 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn4Q61418 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn4Q61418 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn4Q61418 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn4Q61418 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms