Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ptch1Q61115 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC31.3■■■□□ 2.6
Ptch1Q61115 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC31.3■■■□□ 2.6
Ptch1Q61115 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ptch1Q61115 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ptch1Q61115 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ptch1Q61115 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ptch1Q61115 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Ptch1Q61115 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC31.27■■■□□ 2.6
Ptch1Q61115 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ptch1Q61115 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
Ptch1Q61115 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ptch1Q61115 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Ptch1Q61115 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
Ptch1Q61115 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ptch1Q61115 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31.25■■■□□ 2.59
Ptch1Q61115 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ptch1Q61115 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ptch1Q61115 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC31.25■■■□□ 2.59
Ptch1Q61115 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.25■■■□□ 2.59
Ptch1Q61115 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ptch1Q61115 AC112142.1-201ENSMUST00000228796 918 ntBASIC31.24■■■□□ 2.59
Ptch1Q61115 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ptch1Q61115 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ptch1Q61115 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Ptch1Q61115 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ptch1Q61115 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Ptch1Q61115 Gm10849-201ENSMUST00000100397 618 ntBASIC31.24■■■□□ 2.59
Ptch1Q61115 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ptch1Q61115 Gm27405-201ENSMUST00000184201 112 ntBASIC31.24■■■□□ 2.59
Ptch1Q61115 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ptch1Q61115 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ptch1Q61115 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC31.23■■■□□ 2.59
Ptch1Q61115 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC31.23■■■□□ 2.59
Ptch1Q61115 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Ptch1Q61115 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ptch1Q61115 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Ptch1Q61115 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC31.23■■■□□ 2.59
Ptch1Q61115 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC31.22■■■□□ 2.59
Ptch1Q61115 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC31.22■■■□□ 2.59
Ptch1Q61115 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Ptch1Q61115 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ptch1Q61115 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Ptch1Q61115 Gm10657-201ENSMUST00000193528 1031 ntBASIC31.21■■■□□ 2.59
Ptch1Q61115 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Ptch1Q61115 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ptch1Q61115 Gm8770-201ENSMUST00000121113 1109 ntBASIC31.2■■■□□ 2.59
Ptch1Q61115 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
Ptch1Q61115 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC31.2■■■□□ 2.59
Ptch1Q61115 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Ptch1Q61115 AC158990.1-201ENSMUST00000221450 2016 ntBASIC31.2■■■□□ 2.58
Ptch1Q61115 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ptch1Q61115 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ptch1Q61115 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ptch1Q61115 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ptch1Q61115 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Ptch1Q61115 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ptch1Q61115 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ptch1Q61115 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ptch1Q61115 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ptch1Q61115 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
Ptch1Q61115 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ptch1Q61115 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ptch1Q61115 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Ptch1Q61115 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ptch1Q61115 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ptch1Q61115 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC31.17■■■□□ 2.58
Ptch1Q61115 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Ptch1Q61115 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC31.15■■■□□ 2.58
Ptch1Q61115 Gm37179-201ENSMUST00000194862 823 ntBASIC31.15■■■□□ 2.58
Ptch1Q61115 Gm42569-201ENSMUST00000200539 472 ntBASIC31.15■■■□□ 2.58
Ptch1Q61115 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Ptch1Q61115 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ptch1Q61115 Gm5576-201ENSMUST00000075809 1236 ntBASIC31.15■■■□□ 2.58
Ptch1Q61115 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Ptch1Q61115 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Ptch1Q61115 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Ptch1Q61115 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ptch1Q61115 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ptch1Q61115 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC31.13■■■□□ 2.57
Ptch1Q61115 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Ptch1Q61115 Cdc34b-202ENSMUST00000188741 1252 ntBASIC31.12■■■□□ 2.57
Ptch1Q61115 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ptch1Q61115 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC31.12■■■□□ 2.57
Ptch1Q61115 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Ptch1Q61115 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ptch1Q61115 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ptch1Q61115 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ptch1Q61115 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ptch1Q61115 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ptch1Q61115 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ptch1Q61115 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ptch1Q61115 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ptch1Q61115 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC31.1■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms