Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Vps13aQ5H8C4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps13aQ5H8C4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps13aQ5H8C4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps13aQ5H8C4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Vps13aQ5H8C4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps13aQ5H8C4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps13aQ5H8C4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Vps13aQ5H8C4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Vps13aQ5H8C4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.4■■□□□ 1.02
Vps13aQ5H8C4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps13aQ5H8C4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Vps13aQ5H8C4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Vps13aQ5H8C4 Gm10493-201ENSMUST00000097270 612 ntBASIC21.39■■□□□ 1.01
Vps13aQ5H8C4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps13aQ5H8C4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vps13aQ5H8C4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps13aQ5H8C4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps13aQ5H8C4 Gm12251-201ENSMUST00000117893 792 ntBASIC21.37■■□□□ 1.01
Vps13aQ5H8C4 Gm8493-201ENSMUST00000196881 489 ntBASIC21.37■■□□□ 1.01
Vps13aQ5H8C4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps13aQ5H8C4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 Gm42642-201ENSMUST00000200683 355 ntBASIC21.36■■□□□ 1.01
Vps13aQ5H8C4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps13aQ5H8C4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vps13aQ5H8C4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps13aQ5H8C4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.34■■□□□ 1.01
Vps13aQ5H8C4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vps13aQ5H8C4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps13aQ5H8C4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps13aQ5H8C4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vps13aQ5H8C4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Vps13aQ5H8C4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps13aQ5H8C4 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.33■■□□□ 1
Vps13aQ5H8C4 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.33■■□□□ 1
Vps13aQ5H8C4 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.33■■□□□ 1
Vps13aQ5H8C4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps13aQ5H8C4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps13aQ5H8C4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.31■■□□□ 1
Vps13aQ5H8C4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps13aQ5H8C4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps13aQ5H8C4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps13aQ5H8C4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps13aQ5H8C4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.3■■□□□ 1
Vps13aQ5H8C4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.3■■□□□ 1
Vps13aQ5H8C4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.3■■□□□ 1
Vps13aQ5H8C4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vps13aQ5H8C4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.29■■□□□ 1
Vps13aQ5H8C4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.29■■□□□ 1
Vps13aQ5H8C4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps13aQ5H8C4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms