Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Urb1Q571H0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.37■□□□□ 0.69
Urb1Q571H0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Urb1Q571H0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Urb1Q571H0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Urb1Q571H0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Urb1Q571H0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Urb1Q571H0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.36■□□□□ 0.69
Urb1Q571H0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Urb1Q571H0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
Urb1Q571H0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Urb1Q571H0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Urb1Q571H0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.35■□□□□ 0.69
Urb1Q571H0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.35■□□□□ 0.69
Urb1Q571H0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Urb1Q571H0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.35■□□□□ 0.69
Urb1Q571H0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Urb1Q571H0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Urb1Q571H0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Urb1Q571H0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
Urb1Q571H0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Urb1Q571H0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Urb1Q571H0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Urb1Q571H0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.34■□□□□ 0.69
Urb1Q571H0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Urb1Q571H0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Urb1Q571H0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Urb1Q571H0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.69
Urb1Q571H0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Urb1Q571H0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Urb1Q571H0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.33■□□□□ 0.69
Urb1Q571H0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Urb1Q571H0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.33■□□□□ 0.69
Urb1Q571H0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Urb1Q571H0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Urb1Q571H0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Urb1Q571H0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Urb1Q571H0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Urb1Q571H0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
Urb1Q571H0 Mir7075-201ENSMUST00000184187 82 ntBASIC19.32■□□□□ 0.68
Urb1Q571H0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Urb1Q571H0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.32■□□□□ 0.68
Urb1Q571H0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Urb1Q571H0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Urb1Q571H0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Urb1Q571H0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Gm43017-201ENSMUST00000198296 752 ntBASIC19.31■□□□□ 0.68
Urb1Q571H0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Urb1Q571H0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Gm5874-201ENSMUST00000096101 508 ntBASIC19.31■□□□□ 0.68
Urb1Q571H0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Urb1Q571H0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Urb1Q571H0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Urb1Q571H0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Urb1Q571H0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Urb1Q571H0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Urb1Q571H0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Urb1Q571H0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Urb1Q571H0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Urb1Q571H0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Urb1Q571H0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Urb1Q571H0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Urb1Q571H0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Urb1Q571H0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Urb1Q571H0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Urb1Q571H0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Urb1Q571H0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Urb1Q571H0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Urb1Q571H0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Urb1Q571H0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Urb1Q571H0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Urb1Q571H0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Urb1Q571H0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Urb1Q571H0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.26■□□□□ 0.67
Urb1Q571H0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms