Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim40Q3UWA4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim40Q3UWA4 Gm45364-201ENSMUST00000210883 159 ntBASIC19.66■□□□□ 0.74
Trim40Q3UWA4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim40Q3UWA4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim40Q3UWA4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim40Q3UWA4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.64■□□□□ 0.74
Trim40Q3UWA4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim40Q3UWA4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim40Q3UWA4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim40Q3UWA4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim40Q3UWA4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim40Q3UWA4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim40Q3UWA4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim40Q3UWA4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim40Q3UWA4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim40Q3UWA4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim40Q3UWA4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim40Q3UWA4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim40Q3UWA4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.58■□□□□ 0.72
Trim40Q3UWA4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim40Q3UWA4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim40Q3UWA4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim40Q3UWA4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim40Q3UWA4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim40Q3UWA4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim40Q3UWA4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim40Q3UWA4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim40Q3UWA4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms