Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cln6Q3U466 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.83■□□□□ 0.44
Cln6Q3U466 Scarna2-201ENSMUST00000157560 414 ntBASIC17.83■□□□□ 0.44
Cln6Q3U466 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cln6Q3U466 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cln6Q3U466 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cln6Q3U466 Gm16437-201ENSMUST00000025669 507 ntBASIC17.82■□□□□ 0.44
Cln6Q3U466 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cln6Q3U466 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cln6Q3U466 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln6Q3U466 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cln6Q3U466 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.81■□□□□ 0.44
Cln6Q3U466 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cln6Q3U466 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cln6Q3U466 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln6Q3U466 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cln6Q3U466 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.8■□□□□ 0.44
Cln6Q3U466 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.8■□□□□ 0.44
Cln6Q3U466 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln6Q3U466 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln6Q3U466 Gm11687-201ENSMUST00000118911 886 ntBASIC17.8■□□□□ 0.44
Cln6Q3U466 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Cln6Q3U466 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cln6Q3U466 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln6Q3U466 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Cln6Q3U466 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln6Q3U466 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln6Q3U466 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cln6Q3U466 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cln6Q3U466 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.79■□□□□ 0.44
Cln6Q3U466 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln6Q3U466 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cln6Q3U466 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln6Q3U466 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln6Q3U466 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln6Q3U466 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.78■□□□□ 0.44
Cln6Q3U466 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln6Q3U466 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln6Q3U466 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cln6Q3U466 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.77■□□□□ 0.44
Cln6Q3U466 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln6Q3U466 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln6Q3U466 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cln6Q3U466 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.77■□□□□ 0.44
Cln6Q3U466 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln6Q3U466 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.77■□□□□ 0.43
Cln6Q3U466 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cln6Q3U466 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Cln6Q3U466 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.76■□□□□ 0.43
Cln6Q3U466 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cln6Q3U466 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cln6Q3U466 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.76■□□□□ 0.43
Cln6Q3U466 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln6Q3U466 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln6Q3U466 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cln6Q3U466 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln6Q3U466 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cln6Q3U466 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cln6Q3U466 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln6Q3U466 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cln6Q3U466 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.75■□□□□ 0.43
Cln6Q3U466 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln6Q3U466 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cln6Q3U466 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cln6Q3U466 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.74■□□□□ 0.43
Cln6Q3U466 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln6Q3U466 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.74■□□□□ 0.43
Cln6Q3U466 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cln6Q3U466 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.74■□□□□ 0.43
Cln6Q3U466 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.74■□□□□ 0.43
Cln6Q3U466 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.74■□□□□ 0.43
Cln6Q3U466 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln6Q3U466 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cln6Q3U466 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln6Q3U466 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln6Q3U466 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.73■□□□□ 0.43
Cln6Q3U466 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln6Q3U466 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cln6Q3U466 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln6Q3U466 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.72■□□□□ 0.43
Cln6Q3U466 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln6Q3U466 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln6Q3U466 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.72■□□□□ 0.43
Cln6Q3U466 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln6Q3U466 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln6Q3U466 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln6Q3U466 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms