Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.77□□□□□ -0.52
Ush2AQ2QI47 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.77□□□□□ -0.52
Ush2AQ2QI47 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ush2AQ2QI47 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Ush2AQ2QI47 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC11.77□□□□□ -0.52
Ush2AQ2QI47 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ush2AQ2QI47 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ush2AQ2QI47 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ush2AQ2QI47 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ush2AQ2QI47 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.77□□□□□ -0.53
Ush2AQ2QI47 Gm7143-201ENSMUST00000222811 859 ntBASIC11.77□□□□□ -0.53
Ush2AQ2QI47 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Gm12527-201ENSMUST00000117967 564 ntBASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Nsd1-206ENSMUST00000224918 1001 ntBASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Gm7199-201ENSMUST00000118327 1485 ntBASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ush2AQ2QI47 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.75□□□□□ -0.53
Ush2AQ2QI47 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ush2AQ2QI47 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Gm13836-201ENSMUST00000121159 501 ntBASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ush2AQ2QI47 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Gm20760-201ENSMUST00000179197 648 ntBASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.72□□□□□ -0.53
Ush2AQ2QI47 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ush2AQ2QI47 Gm12441-201ENSMUST00000121806 588 ntBASIC11.71□□□□□ -0.53
Ush2AQ2QI47 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ush2AQ2QI47 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ush2AQ2QI47 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ush2AQ2QI47 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Gm9870-201ENSMUST00000063874 645 ntBASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Gm40848-201ENSMUST00000221998 324 ntBASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ush2AQ2QI47 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.69□□□□□ -0.54
Ush2AQ2QI47 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ush2AQ2QI47 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms