Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
Xrn1P97789 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
Xrn1P97789 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
Xrn1P97789 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 AC116713.1-201ENSMUST00000215074 430 ntBASIC30.98■■■□□ 2.55
Xrn1P97789 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Xrn1P97789 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Xrn1P97789 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Xrn1P97789 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Xrn1P97789 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
Xrn1P97789 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC30.96■■■□□ 2.55
Xrn1P97789 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Xrn1P97789 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Xrn1P97789 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Xrn1P97789 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC30.95■■■□□ 2.55
Xrn1P97789 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.95■■■□□ 2.55
Xrn1P97789 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Xrn1P97789 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Xrn1P97789 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
Xrn1P97789 Gm10657-201ENSMUST00000193528 1031 ntBASIC30.95■■■□□ 2.54
Xrn1P97789 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Xrn1P97789 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC30.95■■■□□ 2.54
Xrn1P97789 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
Xrn1P97789 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC30.94■■■□□ 2.54
Xrn1P97789 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Xrn1P97789 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
Xrn1P97789 Gm43173-201ENSMUST00000202246 593 ntBASIC30.94■■■□□ 2.54
Xrn1P97789 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Xrn1P97789 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Xrn1P97789 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
Xrn1P97789 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Xrn1P97789 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC30.93■■■□□ 2.54
Xrn1P97789 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC30.93■■■□□ 2.54
Xrn1P97789 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC30.93■■■□□ 2.54
Xrn1P97789 Krt8-ps-201ENSMUST00000208495 945 ntBASIC30.93■■■□□ 2.54
Xrn1P97789 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Xrn1P97789 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Xrn1P97789 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
Xrn1P97789 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.91■■■□□ 2.54
Xrn1P97789 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Xrn1P97789 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Xrn1P97789 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Xrn1P97789 Gm8770-201ENSMUST00000121113 1109 ntBASIC30.9■■■□□ 2.54
Xrn1P97789 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Xrn1P97789 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Xrn1P97789 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC30.89■■■□□ 2.54
Xrn1P97789 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Xrn1P97789 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Xrn1P97789 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Xrn1P97789 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Xrn1P97789 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Xrn1P97789 Gm21168-201ENSMUST00000199646 1096 ntBASIC30.87■■■□□ 2.53
Xrn1P97789 Gm9870-201ENSMUST00000063874 645 ntBASIC30.87■■■□□ 2.53
Xrn1P97789 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC30.87■■■□□ 2.53
Xrn1P97789 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Xrn1P97789 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
Xrn1P97789 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Xrn1P97789 Gm29257-201ENSMUST00000186115 639 ntBASIC30.86■■■□□ 2.53
Xrn1P97789 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Xrn1P97789 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Xrn1P97789 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Xrn1P97789 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Xrn1P97789 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Xrn1P97789 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Xrn1P97789 AC164629.5-201ENSMUST00000220387 632 ntBASIC30.84■■■□□ 2.53
Xrn1P97789 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Xrn1P97789 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC30.83■■■□□ 2.53
Xrn1P97789 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Xrn1P97789 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Xrn1P97789 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC30.82■■■□□ 2.52
Xrn1P97789 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Xrn1P97789 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Xrn1P97789 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.81■■■□□ 2.52
Xrn1P97789 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Xrn1P97789 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC30.8■■■□□ 2.52
Xrn1P97789 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Xrn1P97789 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC30.79■■■□□ 2.52
Xrn1P97789 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Xrn1P97789 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Xrn1P97789 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Xrn1P97789 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Xrn1P97789 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms