Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp20P57748 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp20P57748 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.4■■□□□ 1.5
Mmp20P57748 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.4■■□□□ 1.5
Mmp20P57748 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.39■■□□□ 1.5
Mmp20P57748 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.39■■□□□ 1.5
Mmp20P57748 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.39■■□□□ 1.5
Mmp20P57748 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mmp20P57748 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.39■■□□□ 1.49
Mmp20P57748 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Mmp20P57748 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Mmp20P57748 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Mmp20P57748 Gm8495-201ENSMUST00000188740 694 ntBASIC24.38■■□□□ 1.49
Mmp20P57748 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.38■■□□□ 1.49
Mmp20P57748 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp20P57748 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.37■■□□□ 1.49
Mmp20P57748 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Mmp20P57748 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Mmp20P57748 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.37■■□□□ 1.49
Mmp20P57748 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Mmp20P57748 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Mmp20P57748 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Mmp20P57748 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Mmp20P57748 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp20P57748 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp20P57748 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
Mmp20P57748 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.36■■□□□ 1.49
Mmp20P57748 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Mmp20P57748 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.36■■□□□ 1.49
Mmp20P57748 Gm43137-201ENSMUST00000198052 594 ntBASIC24.36■■□□□ 1.49
Mmp20P57748 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mmp20P57748 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.35■■□□□ 1.49
Mmp20P57748 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp20P57748 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Mmp20P57748 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.35■■□□□ 1.49
Mmp20P57748 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp20P57748 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Mmp20P57748 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Mmp20P57748 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Mmp20P57748 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Gm18284-201ENSMUST00000172604 624 ntBASIC24.34■■□□□ 1.49
Mmp20P57748 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp20P57748 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp20P57748 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp20P57748 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp20P57748 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Mmp20P57748 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.33■■□□□ 1.49
Mmp20P57748 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Mmp20P57748 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Mmp20P57748 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Mmp20P57748 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
Mmp20P57748 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp20P57748 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp20P57748 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.32■■□□□ 1.48
Mmp20P57748 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.32■■□□□ 1.48
Mmp20P57748 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.32■■□□□ 1.48
Mmp20P57748 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Mmp20P57748 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp20P57748 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Mmp20P57748 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp20P57748 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.31■■□□□ 1.48
Mmp20P57748 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp20P57748 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Mmp20P57748 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp20P57748 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Mmp20P57748 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp20P57748 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp20P57748 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp20P57748 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
Mmp20P57748 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.3■■□□□ 1.48
Mmp20P57748 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp20P57748 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp20P57748 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp20P57748 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp20P57748 Mir7075-201ENSMUST00000184187 82 ntBASIC24.29■■□□□ 1.48
Mmp20P57748 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Mmp20P57748 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp20P57748 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Mmp20P57748 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp20P57748 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp20P57748 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Mmp20P57748 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
Mmp20P57748 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp20P57748 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp20P57748 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp20P57748 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp20P57748 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.26■■□□□ 1.47
Mmp20P57748 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms