Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sssca1P56873 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sssca1P56873 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sssca1P56873 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sssca1P56873 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sssca1P56873 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.91■□□□□ 0.3
Sssca1P56873 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sssca1P56873 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sssca1P56873 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.9■□□□□ 0.3
Sssca1P56873 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sssca1P56873 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sssca1P56873 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.89■□□□□ 0.3
Sssca1P56873 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sssca1P56873 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Scarna2-201ENSMUST00000157560 414 ntBASIC16.89■□□□□ 0.29
Sssca1P56873 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Gm9806-201ENSMUST00000051080 552 ntBASIC16.89■□□□□ 0.29
Sssca1P56873 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sssca1P56873 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sssca1P56873 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.88■□□□□ 0.29
Sssca1P56873 Gm16437-201ENSMUST00000025669 507 ntBASIC16.88■□□□□ 0.29
Sssca1P56873 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Sssca1P56873 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sssca1P56873 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.87■□□□□ 0.29
Sssca1P56873 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.87■□□□□ 0.29
Sssca1P56873 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sssca1P56873 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Sssca1P56873 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sssca1P56873 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sssca1P56873 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Sssca1P56873 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.86■□□□□ 0.29
Sssca1P56873 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sssca1P56873 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sssca1P56873 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sssca1P56873 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sssca1P56873 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sssca1P56873 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sssca1P56873 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sssca1P56873 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sssca1P56873 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Sssca1P56873 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.84■□□□□ 0.29
Sssca1P56873 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sssca1P56873 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sssca1P56873 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sssca1P56873 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sssca1P56873 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.83■□□□□ 0.28
Sssca1P56873 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.83■□□□□ 0.28
Sssca1P56873 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms