Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.79■■□□□ 1.24
NcanP55066 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NcanP55066 Gm42569-201ENSMUST00000200539 472 ntBASIC22.79■■□□□ 1.24
NcanP55066 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.79■■□□□ 1.24
NcanP55066 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NcanP55066 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.78■■□□□ 1.24
NcanP55066 Gm43173-201ENSMUST00000202246 593 ntBASIC22.78■■□□□ 1.24
NcanP55066 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NcanP55066 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
NcanP55066 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NcanP55066 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NcanP55066 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.77■■□□□ 1.24
NcanP55066 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NcanP55066 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.77■■□□□ 1.24
NcanP55066 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.77■■□□□ 1.24
NcanP55066 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.76■■□□□ 1.23
NcanP55066 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NcanP55066 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.76■■□□□ 1.23
NcanP55066 Gm37179-201ENSMUST00000194862 823 ntBASIC22.76■■□□□ 1.23
NcanP55066 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NcanP55066 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.76■■□□□ 1.23
NcanP55066 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NcanP55066 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.75■■□□□ 1.23
NcanP55066 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NcanP55066 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
NcanP55066 Gm12251-201ENSMUST00000117893 792 ntBASIC22.74■■□□□ 1.23
NcanP55066 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
NcanP55066 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NcanP55066 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NcanP55066 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
NcanP55066 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NcanP55066 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
NcanP55066 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.73■■□□□ 1.23
NcanP55066 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NcanP55066 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NcanP55066 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
NcanP55066 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NcanP55066 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NcanP55066 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NcanP55066 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.72■■□□□ 1.23
NcanP55066 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.72■■□□□ 1.23
NcanP55066 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
NcanP55066 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NcanP55066 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NcanP55066 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.71■■□□□ 1.23
NcanP55066 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NcanP55066 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
NcanP55066 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NcanP55066 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NcanP55066 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
NcanP55066 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
NcanP55066 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
NcanP55066 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.7■■□□□ 1.22
NcanP55066 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.7■■□□□ 1.22
NcanP55066 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
NcanP55066 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NcanP55066 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NcanP55066 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NcanP55066 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.7■■□□□ 1.22
NcanP55066 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NcanP55066 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NcanP55066 Gm10849-201ENSMUST00000100397 618 ntBASIC22.69■■□□□ 1.22
NcanP55066 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NcanP55066 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.69■■□□□ 1.22
NcanP55066 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.69■■□□□ 1.22
NcanP55066 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NcanP55066 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NcanP55066 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NcanP55066 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NcanP55066 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NcanP55066 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NcanP55066 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NcanP55066 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NcanP55066 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NcanP55066 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NcanP55066 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.66■■□□□ 1.22
NcanP55066 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcanP55066 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcanP55066 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcanP55066 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcanP55066 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.66■■□□□ 1.22
NcanP55066 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcanP55066 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.65■■□□□ 1.22
NcanP55066 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NcanP55066 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.65■■□□□ 1.22
NcanP55066 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
NcanP55066 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
NcanP55066 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NcanP55066 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
NcanP55066 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
NcanP55066 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.64■■□□□ 1.21
NcanP55066 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NcanP55066 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 402.7 ms