Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdx1P52946 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdx1P52946 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdx1P52946 Gm5812-201ENSMUST00000061073 957 ntBASIC20.87■□□□□ 0.93
Pdx1P52946 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdx1P52946 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pdx1P52946 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.86■□□□□ 0.93
Pdx1P52946 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdx1P52946 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Pdx1P52946 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pdx1P52946 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pdx1P52946 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdx1P52946 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pdx1P52946 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pdx1P52946 Gm10232-201ENSMUST00000089221 720 ntBASIC20.84■□□□□ 0.93
Pdx1P52946 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdx1P52946 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdx1P52946 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdx1P52946 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdx1P52946 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.83■□□□□ 0.93
Pdx1P52946 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdx1P52946 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pdx1P52946 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Pdx1P52946 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdx1P52946 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Pdx1P52946 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.82■□□□□ 0.92
Pdx1P52946 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.82■□□□□ 0.92
Pdx1P52946 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdx1P52946 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pdx1P52946 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdx1P52946 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdx1P52946 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdx1P52946 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdx1P52946 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Pdx1P52946 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdx1P52946 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pdx1P52946 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.8■□□□□ 0.92
Pdx1P52946 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdx1P52946 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdx1P52946 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Pdx1P52946 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.79■□□□□ 0.92
Pdx1P52946 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdx1P52946 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pdx1P52946 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Gm15820-201ENSMUST00000201566 728 ntBASIC20.78■□□□□ 0.92
Pdx1P52946 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.78■□□□□ 0.92
Pdx1P52946 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Pdx1P52946 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdx1P52946 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pdx1P52946 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdx1P52946 Gm15546-201ENSMUST00000122095 826 ntBASIC20.77■□□□□ 0.92
Pdx1P52946 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.77■□□□□ 0.92
Pdx1P52946 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Pdx1P52946 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdx1P52946 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.77■□□□□ 0.92
Pdx1P52946 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdx1P52946 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.76■□□□□ 0.91
Pdx1P52946 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdx1P52946 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdx1P52946 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Pdx1P52946 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.76■□□□□ 0.91
Pdx1P52946 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdx1P52946 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Pdx1P52946 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdx1P52946 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pdx1P52946 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdx1P52946 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.75■□□□□ 0.91
Pdx1P52946 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdx1P52946 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdx1P52946 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.75■□□□□ 0.91
Pdx1P52946 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdx1P52946 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdx1P52946 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.74■□□□□ 0.91
Pdx1P52946 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.74■□□□□ 0.91
Pdx1P52946 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdx1P52946 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.74■□□□□ 0.91
Pdx1P52946 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pdx1P52946 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdx1P52946 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdx1P52946 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdx1P52946 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdx1P52946 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms