Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli1P47806 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.4■□□□□ 0.86
Gli1P47806 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gli1P47806 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.39■□□□□ 0.86
Gli1P47806 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.39■□□□□ 0.85
Gli1P47806 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.39■□□□□ 0.85
Gli1P47806 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gli1P47806 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli1P47806 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli1P47806 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Gli1P47806 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli1P47806 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli1P47806 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gli1P47806 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.37■□□□□ 0.85
Gli1P47806 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Gli1P47806 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Gli1P47806 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gli1P47806 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gli1P47806 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gli1P47806 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli1P47806 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli1P47806 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli1P47806 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli1P47806 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Gli1P47806 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.36■□□□□ 0.85
Gli1P47806 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli1P47806 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Rps24-207ENSMUST00000224568 714 ntBASIC20.35■□□□□ 0.85
Gli1P47806 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.35■□□□□ 0.85
Gli1P47806 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli1P47806 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gli1P47806 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gli1P47806 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli1P47806 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli1P47806 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli1P47806 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Gli1P47806 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Gli1P47806 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli1P47806 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli1P47806 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gli1P47806 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gli1P47806 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.33■□□□□ 0.84
Gli1P47806 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gli1P47806 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli1P47806 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.31■□□□□ 0.84
Gli1P47806 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gli1P47806 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.31■□□□□ 0.84
Gli1P47806 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gli1P47806 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gli1P47806 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gli1P47806 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.3■□□□□ 0.84
Gli1P47806 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli1P47806 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli1P47806 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gli1P47806 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli1P47806 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gli1P47806 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gli1P47806 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.29■□□□□ 0.84
Gli1P47806 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.29■□□□□ 0.84
Gli1P47806 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.29■□□□□ 0.84
Gli1P47806 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli1P47806 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli1P47806 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli1P47806 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gli1P47806 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Gli1P47806 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.28■□□□□ 0.84
Gli1P47806 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gli1P47806 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli1P47806 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli1P47806 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.27■□□□□ 0.84
Gli1P47806 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Gli1P47806 Gm13238-201ENSMUST00000117655 780 ntBASIC20.27■□□□□ 0.84
Gli1P47806 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli1P47806 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Gli1P47806 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gli1P47806 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gli1P47806 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli1P47806 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms