Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.4■□□□□ 0.7
Nkx2-2P42586 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-2P42586 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkx2-2P42586 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.39■□□□□ 0.69
Nkx2-2P42586 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-2P42586 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-2P42586 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-2P42586 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.38■□□□□ 0.69
Nkx2-2P42586 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-2P42586 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-2P42586 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nkx2-2P42586 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-2P42586 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nkx2-2P42586 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-2P42586 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-2P42586 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-2P42586 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-2P42586 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-2P42586 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-2P42586 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-2P42586 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-2P42586 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.33■□□□□ 0.68
Nkx2-2P42586 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nkx2-2P42586 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-2P42586 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-2P42586 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-2P42586 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-2P42586 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx2-2P42586 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-2P42586 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-2P42586 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx2-2P42586 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Gm10232-201ENSMUST00000089221 720 ntBASIC19.31■□□□□ 0.68
Nkx2-2P42586 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-2P42586 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx2-2P42586 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.29■□□□□ 0.68
Nkx2-2P42586 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms