Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.05■■□□□ 1.12
Cxcl12P40224 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cxcl12P40224 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cxcl12P40224 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cxcl12P40224 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cxcl12P40224 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cxcl12P40224 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.04■■□□□ 1.12
Cxcl12P40224 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cxcl12P40224 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cxcl12P40224 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.04■■□□□ 1.12
Cxcl12P40224 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.04■■□□□ 1.12
Cxcl12P40224 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cxcl12P40224 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cxcl12P40224 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cxcl12P40224 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.04■■□□□ 1.12
Cxcl12P40224 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cxcl12P40224 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cxcl12P40224 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cxcl12P40224 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cxcl12P40224 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cxcl12P40224 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cxcl12P40224 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cxcl12P40224 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Cxcl12P40224 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cxcl12P40224 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cxcl12P40224 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cxcl12P40224 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cxcl12P40224 Gm42569-201ENSMUST00000200539 472 ntBASIC22.02■■□□□ 1.12
Cxcl12P40224 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.02■■□□□ 1.12
Cxcl12P40224 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cxcl12P40224 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cxcl12P40224 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.01■■□□□ 1.11
Cxcl12P40224 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.01■■□□□ 1.11
Cxcl12P40224 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22■■□□□ 1.11
Cxcl12P40224 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cxcl12P40224 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cxcl12P40224 Gm27405-201ENSMUST00000184201 112 ntBASIC22■■□□□ 1.11
Cxcl12P40224 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Cxcl12P40224 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cxcl12P40224 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.99■■□□□ 1.11
Cxcl12P40224 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cxcl12P40224 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cxcl12P40224 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cxcl12P40224 Gm43173-201ENSMUST00000202246 593 ntBASIC21.99■■□□□ 1.11
Cxcl12P40224 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
Cxcl12P40224 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.99■■□□□ 1.11
Cxcl12P40224 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cxcl12P40224 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cxcl12P40224 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cxcl12P40224 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cxcl12P40224 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.97■■□□□ 1.11
Cxcl12P40224 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.97■■□□□ 1.11
Cxcl12P40224 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cxcl12P40224 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.97■■□□□ 1.11
Cxcl12P40224 Gm10493-201ENSMUST00000097270 612 ntBASIC21.97■■□□□ 1.11
Cxcl12P40224 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcl12P40224 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcl12P40224 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcl12P40224 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcl12P40224 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcl12P40224 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcl12P40224 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcl12P40224 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.95■■□□□ 1.1
Cxcl12P40224 Gm26571-201ENSMUST00000181399 666 ntBASIC21.95■■□□□ 1.1
Cxcl12P40224 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.95■■□□□ 1.1
Cxcl12P40224 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcl12P40224 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Cxcl12P40224 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cxcl12P40224 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcl12P40224 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cxcl12P40224 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcl12P40224 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcl12P40224 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cxcl12P40224 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.94■■□□□ 1.1
Cxcl12P40224 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.94■■□□□ 1.1
Cxcl12P40224 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcl12P40224 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cxcl12P40224 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.93■■□□□ 1.1
Cxcl12P40224 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.93■■□□□ 1.1
Cxcl12P40224 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cxcl12P40224 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.93■■□□□ 1.1
Cxcl12P40224 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Cxcl12P40224 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cxcl12P40224 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcl12P40224 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcl12P40224 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cxcl12P40224 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcl12P40224 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Cxcl12P40224 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cxcl12P40224 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcl12P40224 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cxcl12P40224 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcl12P40224 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcl12P40224 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcl12P40224 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcl12P40224 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.91■■□□□ 1.1
Cxcl12P40224 Gm42642-201ENSMUST00000200683 355 ntBASIC21.91■■□□□ 1.1
Cxcl12P40224 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcl12P40224 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcl12P40224 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms