Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab5cP35278 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rab5cP35278 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rab5cP35278 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.13■□□□□ 0.33
Rab5cP35278 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rab5cP35278 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rab5cP35278 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.13■□□□□ 0.33
Rab5cP35278 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab5cP35278 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab5cP35278 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab5cP35278 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rab5cP35278 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab5cP35278 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rab5cP35278 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rab5cP35278 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab5cP35278 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab5cP35278 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rab5cP35278 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab5cP35278 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rab5cP35278 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab5cP35278 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rab5cP35278 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab5cP35278 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.08■□□□□ 0.33
Rab5cP35278 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab5cP35278 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab5cP35278 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab5cP35278 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab5cP35278 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab5cP35278 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab5cP35278 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab5cP35278 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rab5cP35278 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab5cP35278 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab5cP35278 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab5cP35278 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.05■□□□□ 0.32
Rab5cP35278 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab5cP35278 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.05■□□□□ 0.32
Rab5cP35278 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rab5cP35278 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab5cP35278 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab5cP35278 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab5cP35278 Zfp131-205ENSMUST00000223812 663 ntBASIC17.04■□□□□ 0.32
Rab5cP35278 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab5cP35278 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab5cP35278 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rab5cP35278 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab5cP35278 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.03■□□□□ 0.32
Rab5cP35278 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab5cP35278 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab5cP35278 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab5cP35278 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab5cP35278 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab5cP35278 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab5cP35278 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab5cP35278 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab5cP35278 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.02■□□□□ 0.31
Rab5cP35278 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab5cP35278 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms