Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.28■■□□□ 1
Rb1P13405 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Rb1P13405 Gm22238-201ENSMUST00000175222 88 ntBASIC21.28■■□□□ 1
Rb1P13405 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.28■■□□□ 1
Rb1P13405 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rb1P13405 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rb1P13405 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rb1P13405 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rb1P13405 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Rb1P13405 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rb1P13405 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rb1P13405 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.26■□□□□ 0.99
Rb1P13405 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rb1P13405 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
Rb1P13405 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rb1P13405 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rb1P13405 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rb1P13405 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.24■□□□□ 0.99
Rb1P13405 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rb1P13405 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rb1P13405 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.24■□□□□ 0.99
Rb1P13405 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.24■□□□□ 0.99
Rb1P13405 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.24■□□□□ 0.99
Rb1P13405 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rb1P13405 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rb1P13405 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rb1P13405 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rb1P13405 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rb1P13405 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.23■□□□□ 0.99
Rb1P13405 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rb1P13405 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rb1P13405 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Gm12922-201ENSMUST00000120626 809 ntBASIC21.22■□□□□ 0.99
Rb1P13405 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.22■□□□□ 0.99
Rb1P13405 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rb1P13405 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rb1P13405 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rb1P13405 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rb1P13405 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.21■□□□□ 0.99
Rb1P13405 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rb1P13405 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rb1P13405 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rb1P13405 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rb1P13405 Gm10399-202ENSMUST00000202768 748 ntBASIC21.2■□□□□ 0.98
Rb1P13405 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rb1P13405 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rb1P13405 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rb1P13405 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rb1P13405 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
Rb1P13405 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rb1P13405 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rb1P13405 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rb1P13405 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.19■□□□□ 0.98
Rb1P13405 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rb1P13405 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rb1P13405 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rb1P13405 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rb1P13405 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rb1P13405 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.17■□□□□ 0.98
Rb1P13405 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rb1P13405 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rb1P13405 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.16■□□□□ 0.98
Rb1P13405 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.16■□□□□ 0.98
Rb1P13405 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rb1P13405 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rb1P13405 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rb1P13405 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms