Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.42■□□□□ 0.38
Cxcl1P12850 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cxcl1P12850 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cxcl1P12850 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cxcl1P12850 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.41■□□□□ 0.38
Cxcl1P12850 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcl1P12850 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.4■□□□□ 0.38
Cxcl1P12850 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cxcl1P12850 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Cxcl1P12850 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcl1P12850 Scarna2-201ENSMUST00000157560 414 ntBASIC17.39■□□□□ 0.37
Cxcl1P12850 Gm9806-201ENSMUST00000051080 552 ntBASIC17.39■□□□□ 0.37
Cxcl1P12850 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl1P12850 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.38■□□□□ 0.37
Cxcl1P12850 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cxcl1P12850 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.38■□□□□ 0.37
Cxcl1P12850 Gm16437-201ENSMUST00000025669 507 ntBASIC17.38■□□□□ 0.37
Cxcl1P12850 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl1P12850 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cxcl1P12850 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cxcl1P12850 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cxcl1P12850 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Cxcl1P12850 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.37■□□□□ 0.37
Cxcl1P12850 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cxcl1P12850 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.37■□□□□ 0.37
Cxcl1P12850 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cxcl1P12850 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl1P12850 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl1P12850 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl1P12850 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl1P12850 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.36■□□□□ 0.37
Cxcl1P12850 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.36■□□□□ 0.37
Cxcl1P12850 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Cxcl1P12850 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.36■□□□□ 0.37
Cxcl1P12850 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl1P12850 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.36■□□□□ 0.37
Cxcl1P12850 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl1P12850 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
Cxcl1P12850 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cxcl1P12850 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.35■□□□□ 0.37
Cxcl1P12850 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl1P12850 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl1P12850 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl1P12850 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl1P12850 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.34■□□□□ 0.37
Cxcl1P12850 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl1P12850 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Cxcl1P12850 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl1P12850 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl1P12850 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl1P12850 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.32■□□□□ 0.36
Cxcl1P12850 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Cxcl1P12850 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl1P12850 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl1P12850 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl1P12850 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl1P12850 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl1P12850 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl1P12850 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms