Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a2P08122 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a2P08122 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Col4a2P08122 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a2P08122 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a2P08122 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a2P08122 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a2P08122 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.01■□□□□ 0.79
Col4a2P08122 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a2P08122 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.01■□□□□ 0.79
Col4a2P08122 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Col4a2P08122 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a2P08122 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20■□□□□ 0.79
Col4a2P08122 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20■□□□□ 0.79
Col4a2P08122 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20■□□□□ 0.79
Col4a2P08122 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a2P08122 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
Col4a2P08122 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a2P08122 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Col4a2P08122 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Col4a2P08122 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a2P08122 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a2P08122 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a2P08122 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col4a2P08122 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.98■□□□□ 0.79
Col4a2P08122 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.98■□□□□ 0.79
Col4a2P08122 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.98■□□□□ 0.79
Col4a2P08122 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a2P08122 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.98■□□□□ 0.79
Col4a2P08122 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a2P08122 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a2P08122 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a2P08122 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.97■□□□□ 0.79
Col4a2P08122 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Col4a2P08122 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a2P08122 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a2P08122 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col4a2P08122 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col4a2P08122 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a2P08122 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a2P08122 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a2P08122 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a2P08122 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a2P08122 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Col4a2P08122 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a2P08122 Gm18284-201ENSMUST00000172604 624 ntBASIC19.94■□□□□ 0.78
Col4a2P08122 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a2P08122 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a2P08122 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a2P08122 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Col4a2P08122 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.93■□□□□ 0.78
Col4a2P08122 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a2P08122 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a2P08122 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a2P08122 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a2P08122 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a2P08122 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a2P08122 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Col4a2P08122 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a2P08122 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a2P08122 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col4a2P08122 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.92■□□□□ 0.78
Col4a2P08122 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a2P08122 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a2P08122 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a2P08122 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.91■□□□□ 0.78
Col4a2P08122 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.91■□□□□ 0.78
Col4a2P08122 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a2P08122 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a2P08122 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col4a2P08122 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col4a2P08122 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a2P08122 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a2P08122 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.9■□□□□ 0.78
Col4a2P08122 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col4a2P08122 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a2P08122 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a2P08122 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms