Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.38■□□□□ 0.53
P01800 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.38■□□□□ 0.53
P01800 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01800 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01800 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01800 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01800 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01800 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.37■□□□□ 0.53
P01800 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.37■□□□□ 0.53
P01800 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
P01800 Gm7332-201ENSMUST00000118351 454 ntBASIC18.37■□□□□ 0.53
P01800 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.37■□□□□ 0.53
P01800 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.37■□□□□ 0.53
P01800 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.37■□□□□ 0.53
P01800 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01800 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
P01800 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P01800 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01800 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01800 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.35■□□□□ 0.53
P01800 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01800 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01800 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
P01800 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01800 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01800 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01800 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01800 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P01800 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01800 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01800 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
P01800 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01800 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P01800 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Gm14523-201ENSMUST00000117260 558 ntBASIC18.31■□□□□ 0.52
P01800 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
P01800 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.31■□□□□ 0.52
P01800 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.31■□□□□ 0.52
P01800 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01800 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01800 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01800 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01800 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.3■□□□□ 0.52
P01800 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.3■□□□□ 0.52
P01800 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01800 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
P01800 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
P01800 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.29■□□□□ 0.52
P01800 Gm27502-201ENSMUST00000183495 199 ntBASIC18.29■□□□□ 0.52
P01800 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01800 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01800 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.28■□□□□ 0.52
P01800 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01800 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
P01800 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
P01800 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms