Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gm45444-201ENSMUST00000211394 898 ntBASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm13238-201ENSMUST00000117655 780 ntBASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Gm5921-201ENSMUST00000075898 882 ntBASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Gm43566-201ENSMUST00000196851 808 ntBASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms