Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igh-VJ558P01758 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.29■□□□□ 0.52
Igh-VJ558P01758 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gm45444-201ENSMUST00000211394 898 ntBASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igh-VJ558P01758 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igh-VJ558P01758 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igh-VJ558P01758 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igh-VJ558P01758 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igh-VJ558P01758 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm13238-201ENSMUST00000117655 780 ntBASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igh-VJ558P01758 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Gm5921-201ENSMUST00000075898 882 ntBASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igh-VJ558P01758 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igh-VJ558P01758 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Gm43566-201ENSMUST00000196851 808 ntBASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igh-VJ558P01758 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igh-VJ558P01758 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms