Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.94■□□□□ 0.62
Abcd4O89016 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abcd4O89016 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Abcd4O89016 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abcd4O89016 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.93■□□□□ 0.62
Abcd4O89016 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Abcd4O89016 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.93■□□□□ 0.62
Abcd4O89016 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.93■□□□□ 0.62
Abcd4O89016 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abcd4O89016 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abcd4O89016 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Abcd4O89016 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Abcd4O89016 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Abcd4O89016 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.93■□□□□ 0.62
Abcd4O89016 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcd4O89016 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcd4O89016 Gm40881-201ENSMUST00000223397 166 ntBASIC18.92■□□□□ 0.62
Abcd4O89016 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcd4O89016 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcd4O89016 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.92■□□□□ 0.62
Abcd4O89016 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcd4O89016 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcd4O89016 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcd4O89016 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcd4O89016 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcd4O89016 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
Abcd4O89016 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.9■□□□□ 0.62
Abcd4O89016 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcd4O89016 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Abcd4O89016 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Abcd4O89016 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Abcd4O89016 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abcd4O89016 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcd4O89016 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcd4O89016 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Abcd4O89016 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcd4O89016 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcd4O89016 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Abcd4O89016 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcd4O89016 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Abcd4O89016 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.87■□□□□ 0.61
Abcd4O89016 Gm10399-202ENSMUST00000202768 748 ntBASIC18.87■□□□□ 0.61
Abcd4O89016 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcd4O89016 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcd4O89016 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Abcd4O89016 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcd4O89016 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Abcd4O89016 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcd4O89016 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Abcd4O89016 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.86■□□□□ 0.61
Abcd4O89016 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcd4O89016 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.86■□□□□ 0.61
Abcd4O89016 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcd4O89016 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Abcd4O89016 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.85■□□□□ 0.61
Abcd4O89016 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcd4O89016 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcd4O89016 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.85■□□□□ 0.61
Abcd4O89016 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcd4O89016 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcd4O89016 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.84■□□□□ 0.61
Abcd4O89016 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.84■□□□□ 0.61
Abcd4O89016 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Abcd4O89016 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd4O89016 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd4O89016 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.84■□□□□ 0.61
Abcd4O89016 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.84■□□□□ 0.61
Abcd4O89016 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Abcd4O89016 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Abcd4O89016 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Abcd4O89016 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Abcd4O89016 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.83■□□□□ 0.6
Abcd4O89016 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.83■□□□□ 0.6
Abcd4O89016 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd4O89016 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd4O89016 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd4O89016 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd4O89016 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd4O89016 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Abcd4O89016 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.82■□□□□ 0.6
Abcd4O89016 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd4O89016 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms