Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac3O88895 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac3O88895 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.68■□□□□ 0.58
Hdac3O88895 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac3O88895 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.67■□□□□ 0.58
Hdac3O88895 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hdac3O88895 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.67■□□□□ 0.58
Hdac3O88895 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hdac3O88895 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac3O88895 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac3O88895 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac3O88895 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hdac3O88895 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hdac3O88895 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.65■□□□□ 0.58
Hdac3O88895 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hdac3O88895 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac3O88895 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.65■□□□□ 0.58
Hdac3O88895 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Hdac3O88895 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac3O88895 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac3O88895 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.64■□□□□ 0.57
Hdac3O88895 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac3O88895 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac3O88895 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.64■□□□□ 0.57
Hdac3O88895 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hdac3O88895 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac3O88895 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.64■□□□□ 0.57
Hdac3O88895 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.64■□□□□ 0.57
Hdac3O88895 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac3O88895 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac3O88895 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac3O88895 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac3O88895 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Hdac3O88895 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac3O88895 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac3O88895 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac3O88895 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac3O88895 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hdac3O88895 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.61■□□□□ 0.57
Hdac3O88895 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.61■□□□□ 0.57
Hdac3O88895 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hdac3O88895 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac3O88895 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hdac3O88895 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.6■□□□□ 0.57
Hdac3O88895 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hdac3O88895 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac3O88895 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.6■□□□□ 0.57
Hdac3O88895 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hdac3O88895 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms