Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf17O88472 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf17O88472 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tnfrsf17O88472 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf17O88472 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.77■□□□□ 0.76
Tnfrsf17O88472 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf17O88472 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.77■□□□□ 0.76
Tnfrsf17O88472 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Amer2-203ENSMUST00000225247 2662 ntBASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf17O88472 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf17O88472 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf17O88472 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.73■□□□□ 0.75
Tnfrsf17O88472 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.73■□□□□ 0.75
Tnfrsf17O88472 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf17O88472 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf17O88472 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf17O88472 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf17O88472 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.72■□□□□ 0.75
Tnfrsf17O88472 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf17O88472 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf17O88472 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf17O88472 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Gm12251-201ENSMUST00000117893 792 ntBASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf17O88472 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf17O88472 Gm26833-201ENSMUST00000180899 440 ntBASIC19.68■□□□□ 0.74
Tnfrsf17O88472 Gm43060-201ENSMUST00000200621 289 ntBASIC19.68■□□□□ 0.74
Tnfrsf17O88472 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.68■□□□□ 0.74
Tnfrsf17O88472 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tnfrsf17O88472 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf17O88472 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tnfrsf17O88472 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tnfrsf17O88472 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf17O88472 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf17O88472 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf17O88472 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf17O88472 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.66■□□□□ 0.74
Tnfrsf17O88472 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf17O88472 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf17O88472 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.65■□□□□ 0.74
Tnfrsf17O88472 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms