Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tulp3O88413 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.59■□□□□ 0.73
Tulp3O88413 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tulp3O88413 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Tulp3O88413 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tulp3O88413 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.57■□□□□ 0.72
Tulp3O88413 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Tulp3O88413 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.57■□□□□ 0.72
Tulp3O88413 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tulp3O88413 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.57■□□□□ 0.72
Tulp3O88413 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tulp3O88413 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tulp3O88413 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tulp3O88413 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.56■□□□□ 0.72
Tulp3O88413 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tulp3O88413 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tulp3O88413 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tulp3O88413 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tulp3O88413 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Tulp3O88413 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tulp3O88413 Gm6311-201ENSMUST00000073790 878 ntBASIC19.55■□□□□ 0.72
Tulp3O88413 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tulp3O88413 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tulp3O88413 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tulp3O88413 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tulp3O88413 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tulp3O88413 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tulp3O88413 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tulp3O88413 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.54■□□□□ 0.72
Tulp3O88413 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tulp3O88413 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Tulp3O88413 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.53■□□□□ 0.72
Tulp3O88413 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Tulp3O88413 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tulp3O88413 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tulp3O88413 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tulp3O88413 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
Tulp3O88413 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Tulp3O88413 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Tulp3O88413 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tulp3O88413 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.52■□□□□ 0.72
Tulp3O88413 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.52■□□□□ 0.71
Tulp3O88413 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tulp3O88413 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tulp3O88413 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tulp3O88413 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tulp3O88413 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tulp3O88413 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Tulp3O88413 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Tulp3O88413 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tulp3O88413 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tulp3O88413 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tulp3O88413 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.49■□□□□ 0.71
Tulp3O88413 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tulp3O88413 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tulp3O88413 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tulp3O88413 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Tulp3O88413 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tulp3O88413 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tulp3O88413 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tulp3O88413 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tulp3O88413 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tulp3O88413 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tulp3O88413 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tulp3O88413 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms