Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm10226O88253 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm10226O88253 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm10226O88253 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm10226O88253 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm10226O88253 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Gm10226O88253 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Gm10226O88253 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Gm10226O88253 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10226O88253 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10226O88253 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10226O88253 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10226O88253 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.31■□□□□ 0.2
Gm10226O88253 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm10226O88253 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm10226O88253 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm10226O88253 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm10226O88253 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10226O88253 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm10226O88253 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm10226O88253 Gm22238-201ENSMUST00000175222 88 ntBASIC16.3■□□□□ 0.2
Gm10226O88253 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm10226O88253 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10226O88253 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10226O88253 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10226O88253 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
Gm10226O88253 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm10226O88253 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm10226O88253 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.28■□□□□ 0.2
Gm10226O88253 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm10226O88253 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10226O88253 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10226O88253 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10226O88253 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10226O88253 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm10226O88253 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm10226O88253 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm10226O88253 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10226O88253 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm10226O88253 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm10226O88253 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm10226O88253 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10226O88253 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm10226O88253 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm10226O88253 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10226O88253 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Gm10226O88253 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms