Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Kcnu1O54982 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
Kcnu1O54982 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Kcnu1O54982 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Kcnu1O54982 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Kcnu1O54982 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Kcnu1O54982 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Kcnu1O54982 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnu1O54982 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Kcnu1O54982 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnu1O54982 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnu1O54982 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Kcnu1O54982 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
Kcnu1O54982 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Kcnu1O54982 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Kcnu1O54982 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.45■■□□□ 1.18
Kcnu1O54982 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.45■■□□□ 1.18
Kcnu1O54982 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnu1O54982 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnu1O54982 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnu1O54982 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnu1O54982 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kcnu1O54982 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kcnu1O54982 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kcnu1O54982 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kcnu1O54982 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
Kcnu1O54982 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Kcnu1O54982 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.43■■□□□ 1.18
Kcnu1O54982 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kcnu1O54982 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Kcnu1O54982 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.42■■□□□ 1.18
Kcnu1O54982 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Kcnu1O54982 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Kcnu1O54982 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kcnu1O54982 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Kcnu1O54982 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kcnu1O54982 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Kcnu1O54982 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kcnu1O54982 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kcnu1O54982 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kcnu1O54982 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kcnu1O54982 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.39■■□□□ 1.17
Kcnu1O54982 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kcnu1O54982 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kcnu1O54982 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Kcnu1O54982 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.38■■□□□ 1.17
Kcnu1O54982 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kcnu1O54982 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kcnu1O54982 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.37■■□□□ 1.17
Kcnu1O54982 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kcnu1O54982 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kcnu1O54982 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kcnu1O54982 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kcnu1O54982 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Kcnu1O54982 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.36■■□□□ 1.17
Kcnu1O54982 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Kcnu1O54982 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kcnu1O54982 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.36■■□□□ 1.17
Kcnu1O54982 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Kcnu1O54982 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Kcnu1O54982 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Kcnu1O54982 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.35■■□□□ 1.17
Kcnu1O54982 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kcnu1O54982 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kcnu1O54982 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.34■■□□□ 1.17
Kcnu1O54982 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.34■■□□□ 1.17
Kcnu1O54982 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kcnu1O54982 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kcnu1O54982 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kcnu1O54982 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Kcnu1O54982 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kcnu1O54982 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.33■■□□□ 1.17
Kcnu1O54982 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kcnu1O54982 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.33■■□□□ 1.17
Kcnu1O54982 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms