Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf12O54907 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.22■□□□□ 0.35
Tnfsf12O54907 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf12O54907 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.21■□□□□ 0.35
Tnfsf12O54907 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf12O54907 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Tnfsf12O54907 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfsf12O54907 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnfsf12O54907 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnfsf12O54907 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf12O54907 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf12O54907 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfsf12O54907 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.18■□□□□ 0.34
Tnfsf12O54907 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.18■□□□□ 0.34
Tnfsf12O54907 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf12O54907 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.18■□□□□ 0.34
Tnfsf12O54907 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf12O54907 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Tnfsf12O54907 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.16■□□□□ 0.34
Tnfsf12O54907 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tnfsf12O54907 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tnfsf12O54907 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf12O54907 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfsf12O54907 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf12O54907 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfsf12O54907 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf12O54907 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf12O54907 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf12O54907 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfsf12O54907 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf12O54907 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf12O54907 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfsf12O54907 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms