Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.36■□□□□ 0.69
Capn1O35350 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.36■□□□□ 0.69
Capn1O35350 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.36■□□□□ 0.69
Capn1O35350 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.36■□□□□ 0.69
Capn1O35350 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Capn1O35350 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.35■□□□□ 0.69
Capn1O35350 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Capn1O35350 Gm7417-201ENSMUST00000192950 473 ntBASIC19.35■□□□□ 0.69
Capn1O35350 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.35■□□□□ 0.69
Capn1O35350 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capn1O35350 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Capn1O35350 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn1O35350 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn1O35350 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn1O35350 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Capn1O35350 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn1O35350 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn1O35350 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn1O35350 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.32■□□□□ 0.68
Capn1O35350 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn1O35350 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.32■□□□□ 0.68
Capn1O35350 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn1O35350 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Capn1O35350 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn1O35350 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Capn1O35350 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Capn1O35350 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Capn1O35350 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn1O35350 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn1O35350 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.3■□□□□ 0.68
Capn1O35350 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capn1O35350 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capn1O35350 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.3■□□□□ 0.68
Capn1O35350 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capn1O35350 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.3■□□□□ 0.68
Capn1O35350 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.29■□□□□ 0.68
Capn1O35350 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Capn1O35350 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.29■□□□□ 0.68
Capn1O35350 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Capn1O35350 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Capn1O35350 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn1O35350 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn1O35350 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn1O35350 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
Capn1O35350 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Capn1O35350 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.28■□□□□ 0.68
Capn1O35350 Gm40881-201ENSMUST00000223397 166 ntBASIC19.28■□□□□ 0.68
Capn1O35350 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn1O35350 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Capn1O35350 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn1O35350 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.27■□□□□ 0.68
Capn1O35350 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capn1O35350 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Capn1O35350 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Capn1O35350 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capn1O35350 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.26■□□□□ 0.67
Capn1O35350 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capn1O35350 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capn1O35350 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Capn1O35350 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capn1O35350 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capn1O35350 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capn1O35350 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Capn1O35350 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.25■□□□□ 0.67
Capn1O35350 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capn1O35350 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capn1O35350 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Capn1O35350 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capn1O35350 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capn1O35350 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capn1O35350 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms