Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm17555F6U8B9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm17555F6U8B9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm17555F6U8B9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm17555F6U8B9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Gm7332-201ENSMUST00000118351 454 ntBASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Gm12366-201ENSMUST00000121722 873 ntBASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Gm5786-201ENSMUST00000085368 882 ntBASIC19.27■□□□□ 0.68
Gm17555F6U8B9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm17555F6U8B9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm17555F6U8B9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm17555F6U8B9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm17555F6U8B9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm17555F6U8B9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm17555F6U8B9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm17555F6U8B9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Gm22567-201ENSMUST00000175542 342 ntBASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm17555F6U8B9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm17555F6U8B9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm17555F6U8B9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.21■□□□□ 0.67
Gm17555F6U8B9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm17555F6U8B9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm17555F6U8B9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm17555F6U8B9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm17555F6U8B9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm17555F6U8B9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm17555F6U8B9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm17555F6U8B9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm17555F6U8B9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms