Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Gm10493-201ENSMUST00000097270 612 ntBASIC34.46■■■■□ 3.11
Ift140E9PY46 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC34.45■■■■□ 3.11
Ift140E9PY46 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Ift140E9PY46 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC34.45■■■■□ 3.1
Ift140E9PY46 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC34.45■■■■□ 3.1
Ift140E9PY46 Gm10657-201ENSMUST00000193528 1031 ntBASIC34.45■■■■□ 3.1
Ift140E9PY46 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
Ift140E9PY46 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Ift140E9PY46 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC34.44■■■■□ 3.1
Ift140E9PY46 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC34.44■■■■□ 3.1
Ift140E9PY46 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC34.44■■■■□ 3.1
Ift140E9PY46 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
Ift140E9PY46 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC34.43■■■■□ 3.1
Ift140E9PY46 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC34.43■■■■□ 3.1
Ift140E9PY46 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Ift140E9PY46 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC34.42■■■■□ 3.1
Ift140E9PY46 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
Ift140E9PY46 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Ift140E9PY46 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Ift140E9PY46 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ift140E9PY46 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ift140E9PY46 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
Ift140E9PY46 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
Ift140E9PY46 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Ift140E9PY46 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ift140E9PY46 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ift140E9PY46 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ift140E9PY46 Cdc34b-202ENSMUST00000188741 1252 ntBASIC34.39■■■■□ 3.1
Ift140E9PY46 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
Ift140E9PY46 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
Ift140E9PY46 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ift140E9PY46 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
Ift140E9PY46 CT025689.6-201ENSMUST00000224991 1104 ntBASIC34.38■■■■□ 3.09
Ift140E9PY46 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ift140E9PY46 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ift140E9PY46 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ift140E9PY46 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Ift140E9PY46 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ift140E9PY46 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Ift140E9PY46 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Ift140E9PY46 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC34.35■■■■□ 3.09
Ift140E9PY46 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Ift140E9PY46 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ift140E9PY46 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ift140E9PY46 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Ift140E9PY46 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ift140E9PY46 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC34.32■■■■□ 3.08
Ift140E9PY46 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Ift140E9PY46 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Ift140E9PY46 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC34.31■■■■□ 3.08
Ift140E9PY46 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
Ift140E9PY46 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC34.31■■■■□ 3.08
Ift140E9PY46 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Ift140E9PY46 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Ift140E9PY46 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Ift140E9PY46 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC34.3■■■■□ 3.08
Ift140E9PY46 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Ift140E9PY46 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC34.3■■■■□ 3.08
Ift140E9PY46 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Ift140E9PY46 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ift140E9PY46 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC34.29■■■■□ 3.08
Ift140E9PY46 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ift140E9PY46 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ift140E9PY46 AC099934.2-201ENSMUST00000196389 70 ntBASIC34.28■■■■□ 3.08
Ift140E9PY46 AC156953.1-201ENSMUST00000196953 70 ntBASIC34.28■■■■□ 3.08
Ift140E9PY46 AC157822.2-201ENSMUST00000200291 70 ntBASIC34.28■■■■□ 3.08
Ift140E9PY46 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ift140E9PY46 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ift140E9PY46 Gm26833-201ENSMUST00000180899 440 ntBASIC34.27■■■■□ 3.08
Ift140E9PY46 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC34.27■■■■□ 3.08
Ift140E9PY46 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Ift140E9PY46 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Ift140E9PY46 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Ift140E9PY46 Gm43759-201ENSMUST00000196925 1261 ntBASIC34.26■■■■□ 3.07
Ift140E9PY46 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Ift140E9PY46 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ift140E9PY46 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ift140E9PY46 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC34.22■■■■□ 3.07
Ift140E9PY46 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Ift140E9PY46 Gm10129-202ENSMUST00000193100 1316 ntBASIC34.22■■■■□ 3.07
Ift140E9PY46 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
Ift140E9PY46 Gm42699-201ENSMUST00000198104 1657 ntBASIC34.22■■■■□ 3.07
Ift140E9PY46 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ift140E9PY46 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ift140E9PY46 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ift140E9PY46 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ift140E9PY46 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ift140E9PY46 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ift140E9PY46 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Ift140E9PY46 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC34.2■■■■□ 3.06
Ift140E9PY46 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Ift140E9PY46 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC34.19■■■■□ 3.06
Ift140E9PY46 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC34.19■■■■□ 3.06
Ift140E9PY46 Gm43060-201ENSMUST00000200621 289 ntBASIC34.19■■■■□ 3.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms