Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shank1D3YZU1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.89■□□□□ 0.62
Shank1D3YZU1 Mir7075-201ENSMUST00000184187 82 ntBASIC18.89■□□□□ 0.62
Shank1D3YZU1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shank1D3YZU1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank1D3YZU1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank1D3YZU1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Shank1D3YZU1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shank1D3YZU1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shank1D3YZU1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Shank1D3YZU1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.88■□□□□ 0.61
Shank1D3YZU1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shank1D3YZU1 Gm12251-201ENSMUST00000117893 792 ntBASIC18.86■□□□□ 0.61
Shank1D3YZU1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank1D3YZU1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Shank1D3YZU1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank1D3YZU1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank1D3YZU1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank1D3YZU1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.85■□□□□ 0.61
Shank1D3YZU1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.84■□□□□ 0.61
Shank1D3YZU1 Gm43173-201ENSMUST00000202246 593 ntBASIC18.84■□□□□ 0.61
Shank1D3YZU1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
Shank1D3YZU1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank1D3YZU1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank1D3YZU1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shank1D3YZU1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank1D3YZU1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Shank1D3YZU1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Shank1D3YZU1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank1D3YZU1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Shank1D3YZU1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.81■□□□□ 0.6
Shank1D3YZU1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank1D3YZU1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.8■□□□□ 0.6
Shank1D3YZU1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank1D3YZU1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank1D3YZU1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms