Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Shroom2A2ALU4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Shroom2A2ALU4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Shroom2A2ALU4 Gm10252-201ENSMUST00000209541 832 ntBASIC34.49■■■■□ 3.11
Shroom2A2ALU4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
Shroom2A2ALU4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC34.49■■■■□ 3.11
Shroom2A2ALU4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Shroom2A2ALU4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Shroom2A2ALU4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC34.48■■■■□ 3.11
Shroom2A2ALU4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
Shroom2A2ALU4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC34.47■■■■□ 3.11
Shroom2A2ALU4 Gm12933-201ENSMUST00000120203 872 ntBASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Shroom2A2ALU4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Shroom2A2ALU4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Shroom2A2ALU4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC34.45■■■■□ 3.1
Shroom2A2ALU4 AV356131-201ENSMUST00000206201 750 ntBASIC34.45■■■■□ 3.1
Shroom2A2ALU4 Gm9870-201ENSMUST00000063874 645 ntBASIC34.45■■■■□ 3.1
Shroom2A2ALU4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Shroom2A2ALU4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Shroom2A2ALU4 Gm18671-201ENSMUST00000214826 683 ntBASIC34.43■■■■□ 3.1
Shroom2A2ALU4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Shroom2A2ALU4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Shroom2A2ALU4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
Shroom2A2ALU4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Shroom2A2ALU4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC34.41■■■■□ 3.1
Shroom2A2ALU4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC34.4■■■■□ 3.1
Shroom2A2ALU4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Shroom2A2ALU4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
Shroom2A2ALU4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Shroom2A2ALU4 Gm10602-201ENSMUST00000098239 609 ntBASIC34.39■■■■□ 3.1
Shroom2A2ALU4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Shroom2A2ALU4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Shroom2A2ALU4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Shroom2A2ALU4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
Shroom2A2ALU4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Shroom2A2ALU4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
Shroom2A2ALU4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Shroom2A2ALU4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Shroom2A2ALU4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Shroom2A2ALU4 Gm7977-201ENSMUST00000193787 748 ntBASIC34.35■■■■□ 3.09
Shroom2A2ALU4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC34.35■■■■□ 3.09
Shroom2A2ALU4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Shroom2A2ALU4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Shroom2A2ALU4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
Shroom2A2ALU4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Shroom2A2ALU4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Shroom2A2ALU4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Shroom2A2ALU4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Mir7071-201ENSMUST00000184847 69 ntBASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Gm8770-201ENSMUST00000121113 1109 ntBASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Gm10653-202ENSMUST00000139570 835 ntBASIC34.33■■■■□ 3.09
Shroom2A2ALU4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC34.32■■■■□ 3.09
Shroom2A2ALU4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC34.32■■■■□ 3.09
Shroom2A2ALU4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC34.32■■■■□ 3.08
Shroom2A2ALU4 Gm10657-201ENSMUST00000193528 1031 ntBASIC34.32■■■■□ 3.08
Shroom2A2ALU4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.08
Shroom2A2ALU4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Shroom2A2ALU4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Shroom2A2ALU4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC34.31■■■■□ 3.08
Shroom2A2ALU4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC34.31■■■■□ 3.08
Shroom2A2ALU4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Shroom2A2ALU4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC34.3■■■■□ 3.08
Shroom2A2ALU4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
Shroom2A2ALU4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Shroom2A2ALU4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
Shroom2A2ALU4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Shroom2A2ALU4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Shroom2A2ALU4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
Shroom2A2ALU4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.07
Shroom2A2ALU4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Shroom2A2ALU4 AC158538.1-201ENSMUST00000225870 294 ntBASIC34.26■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms