Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12d-1A0N8R0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12d-1A0N8R0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav12d-1A0N8R0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12d-1A0N8R0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12d-1A0N8R0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12d-1A0N8R0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav12d-1A0N8R0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav12d-1A0N8R0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Gm9806-201ENSMUST00000051080 552 ntBASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav12d-1A0N8R0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12d-1A0N8R0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Scarna2-201ENSMUST00000157560 414 ntBASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav12d-1A0N8R0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Gm16437-201ENSMUST00000025669 507 ntBASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav12d-1A0N8R0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12d-1A0N8R0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12d-1A0N8R0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav12d-1A0N8R0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav12d-1A0N8R0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12d-1A0N8R0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12d-1A0N8R0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms