Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3854A0A1B0GSS6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3854A0A1B0GSS6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3854A0A1B0GSS6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Gm9870-201ENSMUST00000063874 645 ntBASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3854A0A1B0GSS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3854A0A1B0GSS6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.11■□□□□ 0.97
Gm3854A0A1B0GSS6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3854A0A1B0GSS6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm3854A0A1B0GSS6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Gm3854A0A1B0GSS6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Gm3854A0A1B0GSS6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3854A0A1B0GSS6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3854A0A1B0GSS6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Gm3854A0A1B0GSS6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.1■□□□□ 0.97
Gm3854A0A1B0GSS6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Gm3854A0A1B0GSS6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3854A0A1B0GSS6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gm3854A0A1B0GSS6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.08■□□□□ 0.97
Gm3854A0A1B0GSS6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3854A0A1B0GSS6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Gm3854A0A1B0GSS6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3854A0A1B0GSS6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3854A0A1B0GSS6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm3854A0A1B0GSS6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3854A0A1B0GSS6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3854A0A1B0GSS6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3854A0A1B0GSS6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3854A0A1B0GSS6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3854A0A1B0GSS6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3854A0A1B0GSS6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3854A0A1B0GSS6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3854A0A1B0GSS6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Gm3854A0A1B0GSS6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3854A0A1B0GSS6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3854A0A1B0GSS6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3854A0A1B0GSS6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3854A0A1B0GSS6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3854A0A1B0GSS6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms