Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Golgb1-201ENSMUST00000023534 498 ntBASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-42A0A0A6YY38 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-42A0A0A6YY38 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-42A0A0A6YY38 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-42A0A0A6YY38 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv1-42A0A0A6YY38 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-42A0A0A6YY38 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.56■□□□□ 0.72
Ighv1-42A0A0A6YY38 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-42A0A0A6YY38 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-42A0A0A6YY38 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-42A0A0A6YY38 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-42A0A0A6YY38 Gm12821-201ENSMUST00000120022 600 ntBASIC19.52■□□□□ 0.72
Ighv1-42A0A0A6YY38 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.52■□□□□ 0.72
Ighv1-42A0A0A6YY38 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.52■□□□□ 0.72
Ighv1-42A0A0A6YY38 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ighv1-42A0A0A6YY38 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ighv1-42A0A0A6YY38 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-42A0A0A6YY38 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-42A0A0A6YY38 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-42A0A0A6YY38 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.5■□□□□ 0.71
Ighv1-42A0A0A6YY38 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.49■□□□□ 0.71
Ighv1-42A0A0A6YY38 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Gm9870-201ENSMUST00000063874 645 ntBASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
Ighv1-42A0A0A6YY38 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ighv1-42A0A0A6YY38 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Ighv1-42A0A0A6YY38 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.47■□□□□ 0.71
Ighv1-42A0A0A6YY38 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.46■□□□□ 0.71
Ighv1-42A0A0A6YY38 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms