Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav21-dv12A0A075B6C4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav21-dv12A0A075B6C4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav21-dv12A0A075B6C4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav21-dv12A0A075B6C4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav21-dv12A0A075B6C4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav21-dv12A0A075B6C4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav21-dv12A0A075B6C4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav21-dv12A0A075B6C4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav21-dv12A0A075B6C4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gm10420-201ENSMUST00000121713 882 ntBASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav21-dv12A0A075B6C4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav21-dv12A0A075B6C4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav21-dv12A0A075B6C4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav21-dv12A0A075B6C4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav21-dv12A0A075B6C4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms