Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-5A0A075B6B5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Terc-201ENSMUST00000082862 423 ntBASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Gm4799-201ENSMUST00000095396 657 ntBASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav6-5A0A075B6B5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-5A0A075B6B5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-5A0A075B6B5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-5A0A075B6B5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav6-5A0A075B6B5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-5A0A075B6B5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav6-5A0A075B6B5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-5A0A075B6B5 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.27■□□□□ 0.19
Trav6-5A0A075B6B5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-5A0A075B6B5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-5A0A075B6B5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Iqck-206ENSMUST00000208658 2891 ntBASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-5A0A075B6B5 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-5A0A075B6B5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav6-5A0A075B6B5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-5A0A075B6B5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav6-5A0A075B6B5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-5A0A075B6B5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-5A0A075B6B5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms