Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13-1A0A075B644 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-1A0A075B644 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-1A0A075B644 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-1A0A075B644 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.85□□□□□ -0.03
Trav13-1A0A075B644 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-1A0A075B644 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-1A0A075B644 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.83□□□□□ -0.03
Trav13-1A0A075B644 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav13-1A0A075B644 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav13-1A0A075B644 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav13-1A0A075B644 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Gm7417-201ENSMUST00000192950 473 ntBASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13-1A0A075B644 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms